Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF34Ring finger protein 34. (346 aa)    
Predicted Functional Partners:
EFCAB7
EF-hand calcium binding domain 7.
    
   0.612
ACTR5
Actin related protein 5; Belongs to the actin family.
      
 0.600
RCHY1
Ring finger and CHY zinc finger domain containing 1.
   
  
 0.585
RPS27A
Ubiquitin-like domain-containing protein.
     
  0.557
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
     
  0.550
AIG1
Androgen induced 1.
      
 0.544
UNC119
Unc-119 lipid binding chaperone.
    
   0.538
U3J3I6_ANAPP
Uncharacterized protein.
   
   0.520
CABP1
Calcium binding protein 1.
   
   0.520
SUPT4H1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
   0.510
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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