STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF34Ring finger protein 34. (346 aa)    
Predicted Functional Partners:
TTC1
Tetratricopeptide repeat domain 1.
   
  
 0.636
C3orf14
Chromosome 3 open reading frame 14.
      
 0.611
OTULINL
OTU deubiquitinase with linear linkage specificity like.
      
 0.611
CHIC1
Cysteine rich hydrophobic domain 1.
      
 0.598
SNX8
Sorting nexin 8.
      
 0.586
RTN4IP1
Reticulon 4 interacting protein 1.
      
 0.555
MRPL50
Mitochondrial ribosomal protein L50.
      
 0.548
AIG1
Androgen induced 1.
      
 0.497
GNL3
G protein nucleolar 3.
      
 0.487
GRAMD4
GRAM domain containing 4.
      
 0.485
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.