Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TBC1D4TBC1 domain family member 4. (1077 aa)    
Predicted Functional Partners:
ENSAPLP00000018103
PID domain-containing protein.
 
      0.900
RAP1GDS1
Rap1 GTPase-GDP dissociation stimulator 1.
      
 0.592
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta; Belongs to the 14-3-3 family.
    
  0.584
CCDC59
Coiled-coil domain containing 59.
      
 0.542
FAM241A
Family with sequence similarity 241 member A.
      
 0.532
SUSD6
Sushi domain containing 6.
      
 0.524
PPFIA2
PTPRF interacting protein alpha 2.
      
 0.507
SUCO
SUN domain containing ossification factor.
      
 0.505
STK32C
Serine/threonine kinase 32C.
      
 0.503
RNLS
Renalase, FAD dependent amine oxidase.
      
 0.502
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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