Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBAC2UBA domain containing 2. (460 aa)    
Predicted Functional Partners:
FAF2
Fas associated factor family member 2.
    
 
 0.968
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.948
AMFR
Autocrine motility factor receptor.
    
 
 0.888
EMC3
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 
 0.863
EMC1
Uncharacterized protein.
    
 
 0.821
EMC2
ER membrane protein complex subunit 2.
    
 
 0.810
FAF1
Fas associated factor 1.
    
 
 0.789
TMEM43
Transmembrane protein 43.
    
 
 0.755
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
    
 
 0.750
RAB7A
RAB7A, member RAS oncogene family.
   
   0.748
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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