Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AUP1AUP1 lipid droplet regulating VLDL assembly factor. (412 aa)    
Predicted Functional Partners:
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
 0.981
UBE2G2
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.972
AMFR
Autocrine motility factor receptor.
    
 
 0.909
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 
 0.843
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
   
 
 0.843
GPAT4
Glycerol-3-phosphate acyltransferase 4.
    
 
 0.808
FAF2
Fas associated factor family member 2.
    
 
 0.807
MBOAT2
Membrane bound O-acyltransferase domain containing 2; Belongs to the membrane-bound acyltransferase family.
   
 0.804
U3HZ28_ANAPP
Uncharacterized protein.
    
 
 0.740
APOB
Apolipoprotein B.
    
 
 0.725
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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