STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHTF1Putative homeodomain transcription factor 1. (751 aa)    
Predicted Functional Partners:
RSBN1
Round spermatid basic protein 1.
 
    
 0.816
COPG2
Coatomer protein complex subunit gamma 2.
    
 
 0.756
MSL3
MSL complex subunit 3.
    
 0.735
MSL2
RING-type domain-containing protein.
    
 0.656
DUT
Deoxyuridine triphosphatase.
   
 0.641
NEBL
Nebulette.
    
 
 0.600
RSBN1L
Round spermatid basic protein 1 like.
 
    
 0.550
BPGM
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
     
 0.532
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 0.488
SWT1
SWT1 RNA endoribonuclease homolog.
    
 
 0.485
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.