GTF2F2 protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

GTF2F2

General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (262 aa)

Predicted Functional Partners:

ENSAPLP00000028132

0.999

POLR2E

0.987

GTF2E2

0.968

GTF2E1

0.968

GTF2B

0.965

POLR2B

0.964

ENSAPLP00000019176

0.962

CTDP1

0.956

POLR2H

0.954

POLR2C

0.949

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTDP1	ENSAPLP00000019176	ENSAPLP00000014613	ENSAPLP00000019176	CTD phosphatase subunit 1.	annotation not available	0.965
CTDP1	ENSAPLP00000028132	ENSAPLP00000014613	ENSAPLP00000028132	CTD phosphatase subunit 1.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.970
CTDP1	GTF2B	ENSAPLP00000014613	ENSAPLP00000014972	CTD phosphatase subunit 1.	General transcription factor IIB.	0.888
CTDP1	GTF2F2	ENSAPLP00000014613	ENSAPLP00000004069	CTD phosphatase subunit 1.	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.956
CTDP1	POLR2B	ENSAPLP00000014613	ENSAPLP00000020855	CTD phosphatase subunit 1.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.965
CTDP1	POLR2C	ENSAPLP00000014613	ENSAPLP00000004999	CTD phosphatase subunit 1.	RNA polymerase II subunit C.	0.965
CTDP1	POLR2E	ENSAPLP00000014613	ENSAPLP00000030225	CTD phosphatase subunit 1.	RNA polymerase II subunit E.	0.923
CTDP1	POLR2H	ENSAPLP00000014613	ENSAPLP00000029477	CTD phosphatase subunit 1.	RNA polymerase II subunit H.	0.880
ENSAPLP00000019176	CTDP1	ENSAPLP00000019176	ENSAPLP00000014613	annotation not available	CTD phosphatase subunit 1.	0.965
ENSAPLP00000019176	ENSAPLP00000028132	ENSAPLP00000019176	ENSAPLP00000028132	annotation not available	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.957
ENSAPLP00000019176	GTF2B	ENSAPLP00000019176	ENSAPLP00000014972	annotation not available	General transcription factor IIB.	0.965
ENSAPLP00000019176	GTF2E1	ENSAPLP00000019176	ENSAPLP00000006085	annotation not available	General transcription factor IIE subunit 1.	0.910
ENSAPLP00000019176	GTF2E2	ENSAPLP00000019176	ENSAPLP00000001961	annotation not available	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.872
ENSAPLP00000019176	GTF2F2	ENSAPLP00000019176	ENSAPLP00000004069	annotation not available	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.962
ENSAPLP00000019176	POLR2B	ENSAPLP00000019176	ENSAPLP00000020855	annotation not available	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.985
ENSAPLP00000019176	POLR2C	ENSAPLP00000019176	ENSAPLP00000004999	annotation not available	RNA polymerase II subunit C.	0.976
ENSAPLP00000019176	POLR2E	ENSAPLP00000019176	ENSAPLP00000030225	annotation not available	RNA polymerase II subunit E.	0.976
ENSAPLP00000019176	POLR2H	ENSAPLP00000019176	ENSAPLP00000029477	annotation not available	RNA polymerase II subunit H.	0.971
ENSAPLP00000028132	CTDP1	ENSAPLP00000028132	ENSAPLP00000014613	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	CTD phosphatase subunit 1.	0.970
ENSAPLP00000028132	ENSAPLP00000019176	ENSAPLP00000028132	ENSAPLP00000019176	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	annotation not available	0.957

page 1 of 6

Server load: low (26%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About