STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF9Cdc42 guanine nucleotide exchange factor 9. (513 aa)    
Predicted Functional Partners:
GABRA2
Gamma-aminobutyric acid type A receptor alpha2 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
 0.923
CDC42
Cell division cycle 42.
    
 0.875
AMER3
Uncharacterized protein.
   
  
 0.754
GABRA6
Gamma-aminobutyric acid type A receptor alpha6 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
 0.680
GPHN
Gephyrin.
   
 
 0.620
CHIC1
Cysteine rich hydrophobic domain 1.
   
  
 0.613
AMER2
APC membrane recruitment protein 2.
   
 
 0.612
RPS6KA6
Ribosomal protein S6 kinase.
      
 0.586
FAM155B
Family with sequence similarity 155 member B.
   
  
 0.562
ARHGEF39
Rho guanine nucleotide exchange factor 39.
    
 0.559
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.