STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYT10Synaptotagmin 10. (522 aa)    
Predicted Functional Partners:
RPH3AL
Uncharacterized protein.
 
 
 
 0.836
VPS53
VPS53 subunit of GARP complex.
   
  
 0.789
AFAP1L1
Actin filament associated protein 1 like 1.
      
 0.759
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.755
CNTN6
Contactin 6.
   
  
 0.607
STON2
Stonin-2; Adapter protein involved in endocytic machinery. Involved in the synaptic vesicle recycling. May facilitate clathrin-coated vesicle uncoating; Belongs to the Stoned B family.
   
 0.507
ANXA10
Annexin A10.
      
 0.500
DLK1
Delta like non-canonical Notch ligand 1.
    
 
 0.494
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.487
MADD
MAP kinase activating death domain.
    
   0.483
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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