STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
U3IA28_ANAPPProtein kinase domain-containing protein. (444 aa)    
Predicted Functional Partners:
LRRK1
Leucine rich repeat kinase 1.
    
 0.570
XPC
XPC complex subunit, DNA damage recognition and repair factor.
      
 0.540
STAC
SH3 and cysteine rich domain.
   
 0.514
ENSAPLP00000031194
Uncharacterized protein.
   
  
 0.495
IFT140
Intraflagellar transport 140.
      
 0.487
GAK
Cyclin G associated kinase.
    
 0.472
TRAF7
TNF receptor associated factor 7.
   
 0.464
ENSAPLP00000028885
Uncharacterized protein.
   
 0.464
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
    
 0.421
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.418
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.