Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL27Uncharacterized protein. (85 aa)    
Predicted Functional Partners:
MRPL19
Mitochondrial ribosomal protein L19.
  
 
 0.950
MRPL13
Mitochondrial ribosomal protein L13.
  
 
 0.949
MRPL21
Mitochondrial ribosomal protein L21.
  
 
 0.948
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.947
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.941
MRPL32
Mitochondrial ribosomal protein L32.
  
 
 0.934
U3J0U8_ANAPP
Uncharacterized protein.
  
 
 0.923
MRPS9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.913
MRPS16
Mitochondrial ribosomal protein S16.
  
 
 0.912
U3IF54_ANAPP
RF_PROK_I domain-containing protein.
  
 
 0.911
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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