Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PCTPPhosphatidylcholine transfer protein. (214 aa)    
Predicted Functional Partners:
STARD5
StAR related lipid transfer domain containing 5.
   
  
 0.732
ACOT9
Acyl-CoA thioesterase 9.
      
 0.715
STARD6
StAR related lipid transfer domain containing 6.
   
  
 0.713
STARD4
StAR related lipid transfer domain containing 4.
   
  
 0.676
U3IL60_ANAPP
START domain-containing protein.
      
 0.569
STARD3
Uncharacterized protein.
   
  
 0.557
ENSAPLP00000024896
MENTAL domain-containing protein.
   
  
 0.557
GRAMD1C
GRAM domain containing 1C.
      
 0.557
SLC30A9
Solute carrier family 30 member 9.
      
 0.555
KCTD9
Potassium channel tetramerization domain containing 9.
      
 0.555
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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