STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IA65_ANAPPUncharacterized protein. (219 aa)    
Predicted Functional Partners:
ASTE1
XPG_I_2 domain-containing protein.
 
      0.900
TP53BP1
Tumor protein p53 binding protein 1.
    
 
 0.633
RIF1
Replication timing regulatory factor 1.
    
 
 0.613
FANCM
FA complementation group M.
    
 0.588
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.545
SMN1
Tudor domain-containing protein.
    
 0.516
SNRPD1
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.490
DDX20
DEAD-box helicase 20; Belongs to the DEAD box helicase family.
   
 0.466
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
  0.437
U3I2H1_ANAPP
Uncharacterized protein.
     
 0.431
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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