STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IA65_ANAPPUncharacterized protein. (219 aa)    
Predicted Functional Partners:
ASTE1
XPG_I_2 domain-containing protein.
 
      0.900
FANCM
FA complementation group M.
    
 0.559
TUBGCP2
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.544
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.473
DDX20
DEAD-box helicase 20; Belongs to the DEAD box helicase family.
   
 0.454
U3I2H1_ANAPP
Uncharacterized protein.
     
 0.444
SMN1
Tudor domain-containing protein.
    
 0.442
RIF1
Replication timing regulatory factor 1.
    
 0.440
UBXN7
UBX domain-containing protein 7.
     
 0.423
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.