STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAP3K13Mitogen-activated protein kinase kinase kinase. (955 aa)    
Predicted Functional Partners:
MYCBP2
MYC binding protein 2.
    
 
 0.712
IMMP1L
Mitochondrial inner membrane protease subunit.
      
 0.609
ZZEF1
Zinc finger ZZ-type and EF-hand domain containing 1.
      
 0.594
ENSAPLP00000022504
4HBT domain-containing protein.
      
 0.550
CACYBP
Calcyclin binding protein.
      
 0.546
SS18L1
Uncharacterized protein.
      
 0.545
DUSP1
Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.530
FBXO45
B30.2/SPRY domain-containing protein.
    
 
 0.503
RAB9B
RAB9B, member RAS oncogene family.
      
 0.489
SH3RF3
SH3 domain containing ring finger 3.
      
 0.468
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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