STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCEA1Transcription elongation factor A1. (304 aa)    
Predicted Functional Partners:
SUPT6H
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
    
 0.949
IWS1
TFIIS N-terminal domain-containing protein.
    
 0.940
CTDP1
CTD phosphatase subunit 1.
   
 0.917
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 0.915
EAF2
ELL associated factor 2.
    
 0.909
EAF1
ELL associated factor 1.
   
 0.909
MLLT1
MLLT1 super elongation complex subunit.
    
 0.904
ELL
Elongation factor for RNA polymerase II.
   
 0.904
MLLT3
MLLT3 super elongation complex subunit.
    
 0.904
GTF2B
General transcription factor IIB.
   
 0.896
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.