STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUD7BOTU deubiquitinase 7B. (918 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interaction domain 4A.
      
 0.714
ENSAPLP00000023897
Uncharacterized protein.
   
  0.710
RPS27A
Ubiquitin-like domain-containing protein.
   
  0.708
UBXN7
UBX domain-containing protein 7.
   
   0.705
CHD7
Chromodomain helicase DNA binding protein 7.
    
 
 0.704
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
    
  0.698
ADNP
Activity dependent neuroprotector homeobox.
      
 0.549
PSMD4
Proteasome 26S subunit, non-ATPase 4.
      
 0.546
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.536
WNT9B
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 
 0.510
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.