STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IMMP1LMitochondrial inner membrane protease subunit. (166 aa)    
Predicted Functional Partners:
SZT2
Uncharacterized protein.
    
 0.852
WDR24
WD repeat domain 24.
    
 0.813
NPRL2
NPR2 like, GATOR1 complex subunit.
   
 0.807
WDR59
WD repeat domain 59.
    
 0.807
SPCS2
Signal peptidase complex subunit 2.
   
 0.768
SPCS1
Signal peptidase complex subunit 1.
   
 0.747
ZZEF1
Zinc finger ZZ-type and EF-hand domain containing 1.
      
 0.747
SPCS3
Signal peptidase complex subunit 3.
   
 0.744
DEPDC5
DEP domain-containing protein.
    
 0.726
ENSAPLP00000028801
Uncharacterized protein.
    
 0.726
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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