STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IAF3_ANAPPUncharacterized protein. (475 aa)    
Predicted Functional Partners:
U3I2H1_ANAPP
Uncharacterized protein.
  
 0.983
GTF2H1
General transcription factor IIH subunit 1.
    
 0.929
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.910
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
   
 0.900
U3IBC3_ANAPP
Uncharacterized protein.
 
      0.899
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.873
FANCM
FA complementation group M.
   
 0.863
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
   
 0.834
GTF2H2
General transcription factor IIH subunit.
    
 0.833
MRE11
MRE11 homolog, double strand break repair nuclease.
   
 0.800
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.