Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C11orf1Chromosome 11 open reading frame 1. (137 aa)    
Predicted Functional Partners:
C5orf49
Chromosome 5 open reading frame 49.
   
 
 0.928
FAM183A
Uncharacterized protein.
    
 
 0.927
U3J0F4_ANAPP
Uncharacterized protein.
    
   0.826
CFAP77
Cilia and flagella associated protein 77.
   
 
 0.808
EFHB
Uncharacterized protein.
   
   0.803
CFAP45
Cilia and flagella associated protein 45.
    
   0.789
NME7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
   
   0.775
ENKUR
Enkurin, TRPC channel interacting protein.
    
   0.775
C9orf116
Chromosome 9 open reading frame 116.
    
   0.775
MNS1
Meiosis specific nuclear structural 1.
    
   0.775
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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