STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11orf1Chromosome 11 open reading frame 1. (137 aa)    
Predicted Functional Partners:
TEKT3
Tektin 3.
   
   0.590
C1orf158
Chromosome 1 open reading frame 158.
   
   0.590
EFHB
Uncharacterized protein.
   
   0.590
C5orf49
Chromosome 5 open reading frame 49.
   
   0.546
TEKT2
Tektin 2.
   
   0.545
TEKT1
Tektin 1.
   
   0.541
CFAP77
Cilia and flagella associated protein 77.
   
   0.539
CFAP45
Cilia and flagella associated protein 45.
   
   0.537
MNS1
Meiosis specific nuclear structural 1.
   
   0.529
CFAP52
Cilia and flagella associated protein 52.
   
   0.528
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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