STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BABAM2BRISC and BRCA1 A complex member 2. (397 aa)    
Predicted Functional Partners:
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
    
 0.998
ABRAXAS1
Abraxas 1, BRCA1 A complex subunit.
    
 0.997
ABRAXAS2
Abraxas 2, BRISC complex subunit.
    
 0.994
UIMC1
Ubiquitin interaction motif containing 1.
    
 0.990
ENSAPLP00000020801
Uncharacterized protein.
    
 0.950
BRCA1
BRCA1 DNA repair associated.
    
 0.919
BARD1
BRCA1 associated RING domain 1.
   
 0.883
ATM
Non-specific serine/threonine protein kinase.
    
 0.688
RAD51
DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]
    
 0.679
PAXIP1
PAX interacting protein 1.
   
 0.631
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.