STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPTNOptineurin. (556 aa)    
Predicted Functional Partners:
TBK1
TANK binding kinase 1.
   
 0.984
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.966
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 
 0.912
RPS27A
Ubiquitin-like domain-containing protein.
   
 0.885
IKBKE
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.854
ENSAPLP00000023897
Uncharacterized protein.
   
 0.852
BCL10
CARD domain-containing protein.
    
 0.851
TAB3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.800
TAB2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.800
HTT
Huntingtin.
    
 
 0.786
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.