STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPD3Sphingomyelin phosphodiesterase 3. (662 aa)    
Predicted Functional Partners:
SMPD4
Sphingomyelin phosphodiesterase 4.
     
 0.975
DEGS1
Delta 4-desaturase, sphingolipid 1.
     
 0.954
ENSAPLP00000019809
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.952
SGPP1
Sphingosine-1-phosphate phosphatase 1.
     
 0.947
SGMS1
Sphingomyelin synthase 1.
     
 0.943
PLPP1
Phospholipid phosphatase 1.
     
 0.934
CERK
Ceramide kinase.
     
 0.925
SMPD1
Sphingomyelin phosphodiesterase 1.
     
 0.921
UGCG
UDP-glucose ceramide glucosyltransferase.
     
 0.915
GALC
Galactosylceramidase.
     
 0.913
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.