STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPARDPeroxisome proliferator activated receptor delta. (381 aa)    
Predicted Functional Partners:
RXRA
Retinoid X receptor alpha.
    
0.987
RXRG
NR LBD domain-containing protein.
    
 0.945
FABP5
Fatty acid binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
    
 0.713
NR1D2
Nuclear receptor subfamily 1 group D member 2.
    
0.689
FABP4
Fatty acid binding protein 4; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
    
 0.676
PPARGC1A
PPARG coactivator 1 alpha.
   
 0.622
U3IIX6_ANAPP
Uncharacterized protein.
    
 0.615
NCOR2
Nuclear receptor corepressor 2.
    
 0.615
NCOR1
GPS2_interact domain-containing protein.
    
 0.615
ENSAPLP00000024157
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
  0.572
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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