STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYVE1Lymphatic vessel endothelial hyaluronan receptor 1. (312 aa)    
Predicted Functional Partners:
CCBE1
Collagen and calcium binding EGF domains 1.
     
 0.670
VEGFC
Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family.
    
 0.651
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.518
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.518
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.518
PRKG1
cGMP-dependent protein kinase.
   
 0.512
PRKG2
cGMP-dependent protein kinase.
   
 0.512
ENSAPLP00000029721
PKcGMP_CC domain-containing protein.
   
 0.512
MRVI1
Murine retrovirus integration site 1 homolog.
 
      0.492
CD44
CD44 molecule (Indian blood group).
     
0.489
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.