Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LYVE1Lymphatic vessel endothelial hyaluronan receptor 1. (312 aa)    
Predicted Functional Partners:
PRKG1
cGMP-dependent protein kinase.
   
 0.747
PRKG2
cGMP-dependent protein kinase.
   
 0.747
ENSAPLP00000029721
PKcGMP_CC domain-containing protein.
   
 0.747
MRVI1
Murine retrovirus integration site 1 homolog.
 
    
 0.726
CCBE1
Collagen and calcium binding EGF domains 1.
     
 0.700
VEGFC
Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family.
    
 
 0.643
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.628
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.628
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.628
COL17A1
Collagen type XVII alpha 1 chain.
    
 0.594
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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