STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK1Sidekick cell adhesion molecule 1. (2025 aa)    
Predicted Functional Partners:
U3IDD3_ANAPP
TGc domain-containing protein.
    
 0.645
SEL1L3
SEL1L family member 3.
    
 
 0.587
FHAD1
Forkhead associated phosphopeptide binding domain 1.
      
 0.586
SLC35F1
Solute carrier family 35 member F1.
      
 0.586
SYNC
Syncoilin, intermediate filament protein.
    
 0.571
MRE11
MRE11 homolog, double strand break repair nuclease.
    
 0.552
ILDR2
Immunoglobulin like domain containing receptor 2.
    
 0.545
BICC1
BicC family RNA binding protein 1.
      
 0.522
ZNF516
Zinc finger protein 516.
     
 0.502
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.498
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.