Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCP1BDecapping mRNA 1B. (605 aa)    
Predicted Functional Partners:
DCP1A
Decapping mRNA 1A.
  
 
0.999
DCP2
Decapping mRNA 2.
    
 0.998
EDC4
Enhancer of mRNA decapping 4.
    
 0.995
EDC3
Enhancer of mRNA decapping 3.
   
 0.993
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 0.992
XRN1
5'-3' exoribonuclease 1.
    
 0.935
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.878
LSM14A
LSM14A mRNA processing body assembly factor.
   
 
 0.823
YJEFN3
YjeF N-terminal domain-containing protein.
   
 0.810
EXOSC6
Exosome component 6.
   
 0.810
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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