Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDK13Cyclin dependent kinase 13. (1417 aa)    
Predicted Functional Partners:
CCNK
Cyclin K; Belongs to the cyclin family.
   
 0.970
CDK7
Cyclin dependent kinase 7; Belongs to the protein kinase superfamily.
   
0.933
CDK9
Cyclin dependent kinase 9.
    
0.925
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.910
ENSAPLP00000019176
annotation not available
   
 0.903
CCNT2
Cyclin T2; Belongs to the cyclin family.
   
 0.852
CCNH
Cyclin H; Belongs to the cyclin family.
    
 0.841
CCNT1
Cyclin T1.
   
 0.835
MNAT1
MNAT1 component of CDK activating kinase.
    
 0.826
GTF2H3
General transcription factor IIH subunit 3.
     
 0.793
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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