STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IAR2_ANAPPUncharacterized protein. (2401 aa)    
Predicted Functional Partners:
GRIP1
Glutamate receptor interacting protein 1.
    
 0.769
FAT4
FAT atypical cadherin 4.
      
 0.603
PDGFRA
Platelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development.
   
 
 0.602
PLP1
Proteolipid protein 1.
      
 0.602
RHOV
Ras homolog family member V.
    
 
 0.587
NECTIN3
Nectin cell adhesion molecule 3.
   
  
 0.586
APOB
Apolipoprotein B.
      
 0.555
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
   0.503
U3IS84_ANAPP
IF rod domain-containing protein; Belongs to the intermediate filament family.
      
 0.482
GFAP
IF rod domain-containing protein; Belongs to the intermediate filament family.
      
 0.482
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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