STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35C1Solute carrier family 35 member C1. (364 aa)    
Predicted Functional Partners:
SLC35B3
Solute carrier family 35 member B3.
   
  
 0.754
SLC35C2
Solute carrier family 35 member C2.
   
  
 0.754
TMEM144
Transmembrane protein 144.
   
  
 0.750
SLC35B4
Solute carrier family 35 member B4.
      
 0.748
SLC35A3
Solute carrier family 35 member A3.
   
  
 0.643
RAB9B
RAB9B, member RAS oncogene family.
      
 0.636
SLC35A1
Solute carrier family 35 member A1.
   
  
 0.626
ENSAPLP00000022285
Uncharacterized protein.
   
  
 0.626
ENSAPLP00000027858
annotation not available
   
  
 0.626
SLC35F3
Solute carrier family 35 member F3.
      
 0.622
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.