Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
U3IAT1_ANAPPFibrillar collagen NC1 domain-containing protein. (113 aa)    
Predicted Functional Partners:
COL13A1
Collagen type XIII alpha 1 chain.
 
 
  0.873
COL9A3
Uncharacterized protein.
 
 
  0.838
COL23A1
Uncharacterized protein.
 
 
  0.837
COL8A1
Collagen type VIII alpha 1 chain.
 
 
 
 0.827
COL25A1
Collagen type XXV alpha 1 chain.
 
 
  0.811
COL10A1
C1q domain-containing protein.
 
 
 0.798
COL6A1
VWFA domain-containing protein.
 
 
 0.782
COL9A2
Collagen type IX alpha 2 chain.
 
 
 0.771
ACAN
Aggrecan.
   
 0.754
COL8A2
Collagen type VIII alpha 2 chain.
 
 
  0.706
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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