Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SCCPDHSaccharopine dehydrogenase (putative). (533 aa)    
Predicted Functional Partners:
TMX3
Thioredoxin related transmembrane protein 3.
      
 0.666
TCERG1L
Transcription elongation regulator 1 like.
   
  
 0.577
SPARC
Secreted protein acidic and cysteine rich.
     
  0.546
OLA1
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
     
  0.546
GLRX
Glutaredoxin.
    
   0.538
ENSAPLP00000024121
DAO domain-containing protein.
      
 0.536
STOML1
Stomatin like 1.
   
  
 0.519
U3IAV1_ANAPP
Plastocyanin-like domain-containing protein.
   
 
  0.470
ENSAPLP00000031241
F5/8 type C domain-containing protein.
   
 
  0.470
TMPRSS5
Transmembrane serine protease 5; Belongs to the peptidase S1 family.
     
 0.469
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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