Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
U3IB49_ANAPPUncharacterized protein. (339 aa)    
Predicted Functional Partners:
PLG
Uncharacterized protein; Belongs to the peptidase S1 family.
   
    0.885
ENSAPLP00000017277
C-type lectin domain-containing protein.
   
  
 0.549
BD2
Uncharacterized protein.
   
  
 0.479
ENSAPLP00000029298
Uncharacterized protein.
   
  
 0.474
TXNDC15
Thioredoxin domain containing 15.
      
 0.448
CNMD
Chondromodulin.
      
 0.445
PCDH8
Protocadherin 8.
      
 0.445
AHSG
Alpha 2-HS glycoprotein.
   
  
 0.421
FABP1
Fatty acid binding protein 1.
   
  
 0.418
ARMC6
Armadillo repeat containing 6.
      
 0.406
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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