STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB29RAB29, member RAS oncogene family. (205 aa)    
Predicted Functional Partners:
NUCKS1
Nuclear casein kinase and cyclin dependent kinase substrate 1.
 
    
 0.892
PPM1H
Protein phosphatase, Mg2+/Mn2+ dependent 1H.
    
 
 0.876
RILPL1
Rab interacting lysosomal protein like 1.
      
 0.871
RILPL2
Rab interacting lysosomal protein like 2.
      
 0.871
ENSAPLP00000016646
RabGGT_insert domain-containing protein.
    
 0.773
PM20D1
Peptidase M20 domain containing 1.
      
 0.749
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.723
GAK
Cyclin G associated kinase.
    
 
 0.719
CHM
Uncharacterized protein.
    
 0.683
C11orf49
Chromosome 11 open reading frame 49.
    
   0.598
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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