STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB29RAB29, member RAS oncogene family. (205 aa)    
Predicted Functional Partners:
NUCKS1
Nuclear casein kinase and cyclin dependent kinase substrate 1.
 
    
 0.801
GAK
Cyclin G associated kinase.
    
 
 0.698
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.653
SMCR8
SMCR8-C9orf72 complex subunit.
    
 
 0.647
CHM
Uncharacterized protein.
    
 0.647
PPM1H
Protein phosphatase, Mg2+/Mn2+ dependent 1H.
    
 
 0.634
ENSAPLP00000016646
RabGGT_insert domain-containing protein.
    
 0.625
WDR41
WD repeat domain 41.
      
 0.621
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
    
 
 0.557
RILPL2
Rab interacting lysosomal protein like 2.
      
 0.553
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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