STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SETD2Uncharacterized protein. (582 aa)    
Predicted Functional Partners:
IWS1
TFIIS N-terminal domain-containing protein.
   
 
 0.923
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.912
DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
 
 0.909
RNF20
E3 ubiquitin protein ligase.
   
 
 0.905
ENSAPLP00000019176
annotation not available
   
 0.904
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
   
 
 0.901
SUPT6H
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
  
 
 0.897
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 
 0.889
POLR2C
RNA polymerase II subunit C.
    
 0.887
SUPT4H1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 
 0.885
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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