STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC7A6OSSolute carrier family 7 member 6 opposite strand. (326 aa)    
Predicted Functional Partners:
POLR2E
RNA polymerase II subunit E.
   
 
 0.870
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.867
POLR2D
RPOL4c domain-containing protein.
   
 
 0.863
POLR2F
RNA polymerase II subunit F.
    
 
 0.861
POLR2C
RNA polymerase II subunit C.
    
 
 0.839
POLR2L
RNA polymerase II subunit L.
    
 
 0.837
POLR2H
RNA polymerase II subunit H.
   
 
 0.822
POLR2J
RNA polymerase II subunit J.
    
 
 0.717
UPK3BL1
Uncharacterized protein.
    
 
 0.717
POLR2K
RNA polymerase II subunit K.
    
 
 0.646
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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