STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IB68_ANAPPIF rod domain-containing protein; Belongs to the intermediate filament family. (613 aa)    
Predicted Functional Partners:
TP63
Tumor protein 63 (p63); Acts as a sequence specific DNA binding transcriptional activator or repressor. The isoforms contain a varying set of transactivation and auto-regulating transactivation inhibiting domains thus showing an isoform specific activity. May be required in conjunction with TP73/p73 for initiation of p53/TP53 dependent apoptosis in response to genotoxic insults and the presence of activated oncogenes.
   
 0.637
FOXJ1
Forkhead box J1.
    
 0.620
CDH1
Uncharacterized protein.
    
 0.609
ENSAPLP00000022190
BRICHOS domain-containing protein.
      
 0.592
ACTR5
Actin related protein 5; Belongs to the actin family.
    
 0.566
NFRKB
Nuclear factor related to kappaB binding protein.
    
 0.548
MCRS1
Microspherule protein 1.
    
 0.537
INO80
INO80 complex ATPase subunit.
    
 0.534
INO80D
INO80 complex subunit D.
    
 0.527
INO80C
INO80 complex subunit C.
    
 0.525
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.