STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACNA2D4VWFA domain-containing protein. (568 aa)    
Predicted Functional Partners:
CAMK2D
Protein kinase domain-containing protein.
   
 
 0.905
PRKACB
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 
  0.901
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
     
  0.900
ENSAPLP00000017101
VGCC_alpha2 domain-containing protein.
 
      0.900
ENSAPLP00000025733
VGCC_alpha2 domain-containing protein.
 
      0.777
ENSAPLP00000022318
VGCC_alpha2 domain-containing protein.
 
      0.776
HMCN1
Hemicentin 1.
      
 0.712
TENM4
Teneurin transmembrane protein 4.
      
 0.712
CACNB4
SH3 domain-containing protein.
   
 0.669
RASGRF1
Ras protein specific guanine nucleotide releasing factor 1.
   
 
  0.653
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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