STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POFUT1Protein O-fucosyltransferase 1. (386 aa)    
Predicted Functional Partners:
POFUT2
Protein O-fucosyltransferase 2.
   
 
 0.966
POGLUT1
Protein O-glucosyltransferase 1.
   
 
 0.849
NOTCH1
Uncharacterized protein.
    
 0.744
ENSAPLP00000028254
Uncharacterized protein.
    
 0.744
KIF3B
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
 
    
 0.739
XKR7
XK-related protein.
      
 0.719
SLC35D1
Uncharacterized protein.
      
 0.661
SLC35C1
Solute carrier family 35 member C1.
      
 0.637
TSR3
Probable ribosome biogenesis protein TSR3; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.636
SLC35B4
Solute carrier family 35 member B4.
      
 0.587
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.