STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRVI1Murine retrovirus integration site 1 homolog. (794 aa)    
Predicted Functional Partners:
PRKG1
cGMP-dependent protein kinase.
   
 0.973
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.967
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.960
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.960
PRKG2
cGMP-dependent protein kinase.
   
 0.747
ENSAPLP00000029721
PKcGMP_CC domain-containing protein.
   
 0.747
PERM1
Uncharacterized protein.
    
 0.731
LYVE1
Lymphatic vessel endothelial hyaluronan receptor 1.
 
    
 0.726
SAMD11
Sterile alpha motif domain containing 11.
    
 
 0.721
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
    
 
 0.720
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.