STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPCS1Signal peptidase complex subunit 1. (98 aa)    
Predicted Functional Partners:
SPCS3
Signal peptidase complex subunit 3.
   
 0.996
SPCS2
Signal peptidase complex subunit 2.
   
 0.995
SEC11A
Signal peptidase complex catalytic subunit SEC11.
   
 0.927
SEC11C
SEC11 homolog C, signal peptidase complex subunit.
   
 0.927
GRP
Uncharacterized protein.
   
 0.888
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.793
SEC61B
SEC61 translocon beta subunit.
   
 0.770
CPZ
Carboxypeptidase Z.
      
 0.748
IMMP1L
Mitochondrial inner membrane protease subunit.
   
 0.747
ITFG2
Integrin alpha FG-GAP repeat containing 2.
   
 0.747
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.