STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SORCS1Sortilin related VPS10 domain containing receptor 1. (1254 aa)    
Predicted Functional Partners:
GAK
Cyclin G associated kinase.
     
 0.906
CENPJ
Centromere protein J.
      
 0.652
PARP4
Poly [ADP-ribose] polymerase.
      
 0.652
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
     
 0.583
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
 
 0.552
KHDRBS2
KH RNA binding domain containing, signal transduction associated 2.
      
 0.544
LZTS1
Leucine zipper tumor suppressor 1.
      
 0.543
IGF2R
Insulin like growth factor 2 receptor.
    
 0.526
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.509
NMUR2
Neuromedin U receptor 2; Belongs to the G-protein coupled receptor 1 family.
      
 0.504
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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