Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SORCS1Sortilin related VPS10 domain containing receptor 1. (1254 aa)    
Predicted Functional Partners:
SORT1
Sortilin.
    
 
 0.740
CENPJ
Centromere protein J.
      
 0.690
PARP4
Poly [ADP-ribose] polymerase.
      
 0.690
NMUR2
Neuromedin U receptor 2; Belongs to the G-protein coupled receptor 1 family.
      
 0.570
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.570
KLHDC7A
Kelch domain containing 7A.
      
 0.569
LZTS1
Leucine zipper tumor suppressor 1.
      
 0.560
GAK
Cyclin G associated kinase.
     
 0.556
KHDRBS2
KH RNA binding domain containing, signal transduction associated 2.
   
  
 0.556
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
 
 0.553
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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