STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUSD1Sushi domain containing 1. (753 aa)    
Predicted Functional Partners:
SUSD2
Sushi domain containing 2.
     
 0.694
PUM3
Pumilio RNA binding family member 3.
      
 0.668
RCHY1
Ring finger and CHY zinc finger domain containing 1.
      
 0.653
TDRD3
Tudor domain containing 3.
    
 
 0.639
SH3BP2
SH3 domain binding protein 2.
      
 0.637
SLC46A2
Solute carrier family 46 member 2.
    
 
 0.614
HSPA4L
Heat shock protein family A (Hsp70) member 4 like.
    
 0.588
AP5M1
Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family.
    
 
 0.578
SPG11
SPG11 vesicle trafficking associated, spatacsin.
      
 0.574
GMFB
Glia maturation factor beta.
     
 0.555
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.