STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
U3IBC3_ANAPPUncharacterized protein. (1127 aa)    
Predicted Functional Partners:
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.927
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
   
 0.926
XPA
XPA, DNA damage recognition and repair factor.
    
 0.909
U3IAF3_ANAPP
Uncharacterized protein.
 
      0.899
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
   
 0.878
GTF2H1
General transcription factor IIH subunit 1.
    
 0.866
U3I2H1_ANAPP
Uncharacterized protein.
  
 0.850
ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit.
    
 0.841
FANCM
FA complementation group M.
   
 0.833
GTF2H2
General transcription factor IIH subunit.
    
 0.832
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.