STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP34Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family. (3522 aa)    
Predicted Functional Partners:
ENSAPLP00000023897
Uncharacterized protein.
   
 0.879
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.874
RPS27A
Ubiquitin-like domain-containing protein.
   
 0.870
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
    
 0.832
ASH1L
ASH1 like histone lysine methyltransferase.
   
 
 0.799
TDRD3
Tudor domain containing 3.
      
 0.747
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.671
PHF3
PHD finger protein 3.
   
 
  0.626
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
   
   0.613
SETD2
Uncharacterized protein.
   
 
 0.612
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.