STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLT8D1Glycosyltransferase 8 domain containing 1. (225 aa)    
Predicted Functional Partners:
SH3TC1
SH3 domain and tetratricopeptide repeats 1.
      
 0.769
OSGEP
O-sialoglycoprotein endopeptidase.
      
 0.719
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.665
SUPT7L
SPT7 like, STAGA complex gamma subunit.
   
  
 0.648
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
      
 0.607
GLE1
GLE1 RNA export mediator.
      
 0.589
SFMBT1
Scm like with four mbt domains 1.
      
 0.588
OGFOD2
2-oxoglutarate and iron dependent oxygenase domain containing 2.
      
 0.575
ASPHD2
Aspartate beta-hydroxylase domain containing 2.
      
 0.573
ERLIN1
ER lipid raft associated 1.
   
  
 0.558
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.