STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAAL1Uncharacterized protein. (470 aa)    
Predicted Functional Partners:
SERGEF
Secretion regulating guanine nucleotide exchange factor.
 
    
 0.607
ANO9
Anoctamin.
      
 0.564
TMEM19
Transmembrane protein 19.
      
 0.553
COMTD1
Catechol-O-methyltransferase domain containing 1.
    
 
 0.552
CAPS2
Calcyphosine 2.
      
 0.547
CLDN3
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.525
KCNK17
Potassium two pore domain channel subfamily K member 17; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.485
SLC13A2
Solute carrier family 13 member 2.
      
 0.485
GTF2H1
General transcription factor IIH subunit 1.
      
 0.479
SWAP70
Switching B cell complex subunit SWAP70.
      
 0.475
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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