Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
CLIC3Chloride intracellular channel 3. (364 aa)    
Predicted Functional Partners:
MAPK15
Mitogen-activated protein kinase.
    
 
 0.704
RFTN2
Raftlin family member 2.
      
 0.569
TMEM141
Transmembrane protein 141.
      
 0.503
CLCN5
Chloride channel protein.
      
 0.492
CLCN3
Chloride channel protein.
      
 0.483
C1orf21
Chromosome 1 open reading frame 21.
      
 0.467
ABCA2
ATP binding cassette subfamily A member 2.
 
    
 0.467
C9orf64
Queuosine salvage protein; Involved in salvaging queuosine.
      
 0.441
CIAO2A
Cytosolic iron-sulfur assembly component 2A.
      
 0.438
MOSPD2
Motile sperm domain containing 2.
      
 0.436
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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