STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3GAP2RAB3 GTPase activating non-catalytic protein subunit 2. (1381 aa)    
Predicted Functional Partners:
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
   
 0.999
TMCO4
Transmembrane and coiled-coil domains 4.
      
 0.846
VAPB
VAMP associated protein B and C.
   
 
 0.842
U3I4J9_ANAPP
Uncharacterized protein.
     
 0.784
RAB18
Uncharacterized protein.
     
 0.784
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
     
 0.748
C2CD2
C2 calcium dependent domain containing 2.
      
 0.703
DMXL2
Dmx like 2.
   
  
 0.673
NBAS
Neuroblastoma amplified sequence.
      
 0.670
SEC22A
SEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family.
      
 0.665
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: medium (76%) [HD]