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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM141Transmembrane protein 141. (190 aa)    
Predicted Functional Partners:
RBMS3
RNA binding motif single stranded interacting protein 3.
      
 0.707
SAMSN1
SAM domain, SH3 domain and nuclear localization signals 1.
      
 0.636
OSBP2
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.635
CLIC3
Chloride intracellular channel 3.
 
    
 0.616
TRIB2
Tribbles pseudokinase 2.
      
 0.609
ENSAPLP00000026513
Solute carrier organic anion transporter family member.
      
 0.602
IGFALS
Insulin like growth factor binding protein acid labile subunit.
      
 0.586
TMEM244
Transmembrane protein 244.
      
 0.561
EGFL7
EGF like domain multiple 7.
      
 0.555
PUSL1
tRNA pseudouridine synthase.
      
 0.536
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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