STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM141Transmembrane protein 141. (190 aa)    
Predicted Functional Partners:
TMEM244
Transmembrane protein 244.
      
 0.850
PUSL1
tRNA pseudouridine synthase.
      
 0.682
RSRC1
Arginine and serine rich coiled-coil 1.
   
  
 0.668
GANAB
Glucosidase II alpha subunit; Belongs to the glycosyl hydrolase 31 family.
      
 0.654
ENSAPLP00000024985
FOXP-CC domain-containing protein.
      
 0.561
RBMS3
RNA binding motif single stranded interacting protein 3.
      
 0.548
OSBP2
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.544
CLIC3
Chloride intracellular channel 3.
      
 0.503
EIF3F
Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
      
 0.487
U3IF16_ANAPP
Uncharacterized protein.
   
  
 0.478
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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