STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THSD7AThrombospondin type 1 domain containing 7A. (1109 aa)    
Predicted Functional Partners:
PLA2R1
Phospholipase A2 receptor 1.
     
 0.720
EXT2
Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family.
      
 0.693
SBSPON
Somatomedin B and thrombospondin type 1 domain containing.
     
 0.627
NELL1
Neural EGFL like 1.
   
 0.625
SPATA48
Spermatogenesis associated 48.
      
 0.571
CDH11
Cadherin 11; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.566
TMEM179
Transmembrane protein 179.
      
 0.548
SGPP2
Sphingosine-1-phosphate phosphatase 2.
      
 0.507
ADAMTS18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
     
  0.504
EXT1
Exostosin glycosyltransferase 1; Belongs to the glycosyltransferase 47 family.
   
  
 0.502
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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