STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF25Ring finger protein 25. (400 aa)    
Predicted Functional Partners:
UBE2D2
Ubiquitin conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.674
UBE2D3
Ubiquitin conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.674
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
      
 0.669
NUP214
Nucleoporin 214.
      
 0.629
PSMA6
Proteasome subunit alpha type.
      
 0.628
CCDC12
Coiled-coil domain containing 12.
      
 0.602
UBE2E2
Ubiquitin conjugating enzyme E2 E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.600
UBE2E3
Ubiquitin conjugating enzyme E2 E3; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.600
ENSAPLP00000017612
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.600
RNF11
Ring finger protein 11.
      
 0.597
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (24%) [HD]